Re: [Freesurfer] func2tal

2007-04-11 Thread Doug Greve
Do you want to register them or reslice them? What common space? We use mni305. What version of freesurfer are you using? Usually, you would register (not reslice) your bold to your freesurfer anatomical. As part of the freesurfer recon, the anat is registered (not resliced) to mni305, and runnin

[Freesurfer] func2tal

2007-04-09 Thread Alessandro Gagliardi
I'm trying to regester my BOLD images to a common space. I tried func2tal but I got ERROR: only selxavg, selavg, and sfa functypes are currently supported. When I try to run mri_vol2vol --fstal, it expects talmni305 in my subjects directory which I don't have. Did I miss a step in the installat

Re: [Freesurfer] func2tal-sess question

2006-09-01 Thread Balaji Lakshmanan
Cameron Ellis wrote: Hi, Quick simple question I hope: does running func2tal-sess with two groups at once with a sessid that includes them both and running func2tal with each group separately result in any difference? by groups do you mean the list of subjects you include in your -sf file? if s

[Freesurfer] func2tal-sess question

2006-09-01 Thread Cameron Ellis
Hi, Quick simple question I hope: does running func2tal-sess with two groups at once with a sessid that includes them both and running func2tal with each group separately result in any difference? And if you do need to resample your groups separately do you need to do this under 2 different analyse

[Freesurfer] func2tal

2004-05-22 Thread Wei Qiu
Hi all, I am trying to register a functional data (45 minutes, 142049280b) into MNI tal space without any statistic data analyse. I have done mktalxfm-sess, autoreg-sess, tkregister-sess and manual registration and achieved register.dat Then I ran func2tal. ** func2tal -funcstem