Re: [Freesurfer] freesurfer trouble with FTLD subjects

2014-10-28 Thread Bruce Fischl
sounds good Bruce On Mon, 27 Oct 2014, Adam Mezher wrote: Hi Bruce, I performed both cp and wm edits and was able to fix most of the subjects in the meantime. I’ll still see if I can get it ftp’d over to you guys to take a look for future reference. thanks! Adam Hi Adam it's impossible

Re: [Freesurfer] freesurfer trouble with FTLD subjects

2014-10-27 Thread Adam Mezher
Hi Bruce, I performed both cp and wm edits and was able to fix most of the subjects in the meantime. I’ll still see if I can get it ftp’d over to you guys to take a look for future reference. thanks! Adam Hi Adam it's impossible to say without seeing some examples. If you upload a proble

Re: [Freesurfer] freesurfer trouble with FTLD subjects

2014-10-22 Thread Bruce Fischl
Hi Adam it's impossible to say without seeing some examples. If you upload a problematic subject (the entire subject directory from recon-all) we will take a look cheers Bruce On Wed, 22 Oct 2014, Adam Mezher wrote: > Hi All, > I'm running a number of subjects who have FTLD and their > surfarce

[Freesurfer] freesurfer trouble with FTLD subjects

2014-10-22 Thread Adam Mezher
Hi All, I'm running a number of subjects who have FTLD and their surfarce/parcellation outputs are quite poor (especially in the frontal lobe obviously). Are there any expert commands that can be used to attempt to fix this issue without having to do individual edits? Most of the subjects have und