Re: [Freesurfer] freesurfer multithread

2017-01-04 Thread Li,Tengfei
great! That works. Best Tengfei -Original Message- From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl Sent: Wednesday, January 04, 2017 11:28 AM To: Freesurfer support list Subject: Re: [Freesurfer] freesurfer

Re: [Freesurfer] freesurfer multithread

2017-01-04 Thread Bruce Fischl
use -openmp 8 instead cheers Bruce On Wed, 4 Jan 2017, Li,Tengfei wrote: Hello,   Is there some way to use multithread in recon-all to speed up?   I searched the freesurfer website and try using   recon-all -autorecon-all -itkthreads 8 -subjid SUBID      It simply gives an error mess

[Freesurfer] freesurfer multithread

2017-01-04 Thread Li,Tengfei
Hello, Is there some way to use multithread in recon-all to speed up? I searched the freesurfer website and try using recon-all -autorecon-all -itkthreads 8 -subjid SUBID It simply gives an error message " ERROR: Flag -itkthreads unrecognized. " Thanks! Best Tengfei The information containe