Re: [Freesurfer] fitting a priori ROI masks to freesurfer

Hi Sonya you are probably better asking the AFNI folks how to output a freesurfer label. I'll cc Ziad on this so he can chime in. cheers Bruce On Fri, 23 Mar 2012, sonya kaur wrote: > Dear all,I have an a priori ROI mask previously created in AFNI for > functional data. My hypothesis requires

[Freesurfer] fitting a priori ROI masks to freesurfer

Dear all, I have an a priori ROI mask previously created in AFNI for functional data. My hypothesis requires me to derive cortical thickness values for the same ROIs. How would I obtain the values using these ROIs from freesurfer? The mask was generated in Talairach space and are surface level ROIs