Re: [Freesurfer] Exiting with errors but not sure why

2013-05-02 Thread Douglas N Greve
t. > > Thanks, > m > > > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Thursday, May 02, 2013 11:45 AM > To: freesurfer@nmr.mgh

Re: [Freesurfer] Exiting with errors but not sure why

2013-05-02 Thread Borzello, Mia
d.edu Subject: Re: [Freesurfer] Exiting with errors but not sure why Hi Mia, I'm glad your enjoyed the course. Can you send the recon-all.log file from the subject/scripts folder? doug On 05/02/2013 11:36 AM, Borzello, Mia wrote: > Hi freesurfers! > > Great tutorial this week! >

Re: [Freesurfer] Exiting with errors but not sure why

2013-05-02 Thread Douglas N Greve
Hi Mia, I'm glad your enjoyed the course. Can you send the recon-all.log file from the subject/scripts folder? doug On 05/02/2013 11:36 AM, Borzello, Mia wrote: > Hi freesurfers! > > Great tutorial this week! > > I've recently run a recon, and it's exited with errors, but I'm not > completely su

[Freesurfer] Exiting with errors but not sure why

2013-05-02 Thread Borzello, Mia
Hi freesurfers! Great tutorial this week! I've recently run a recon, and it's exited with errors, but I'm not completely sure why. I've attached the error.log, but le tme know if I should attach another file. Thanks so much, Mia error.log Description: error.log __

Re: [Freesurfer] exiting with errors

2010-10-21 Thread Nick Schmansky
i've never encountered this particular error. do you have an alternate MNI package installed in your path somewhere? is it just with some scans and not others? does the input data look ok on the ones that crash? n. On Thu, 2010-10-21 at 12:50 -0500, Nathan Dankner wrote: > Hi all, > > I've r

[Freesurfer] exiting with errors

2010-10-21 Thread Nathan Dankner
Hi all, I've run into a recurring error with some scans that I am running. It is duplicated below: ncopen: filename "./tmp.mri_nu_correct.mni.8091/0/nu1_residue.mnc": Not a netCD$ miopen: MINC package entry point nu_estimate_np_and_em: crashed while running mincmath (termination status=768) nu_c