Re: [Freesurfer] errors in library in new version of Freesurfer

2006-06-06 Thread Joongnam Yang
Thanks for the question. Here is the info that I can provide. (1) When I did 'source' the *.csh, there was no error. here is the output freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3 Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer

Re: [Freesurfer] errors in library in new version of Freesurfer

2006-06-06 Thread Nick Schmansky
What is the output when this is typed: source $FREESURFER_HOME/SetUpFreeSurfer.csh and this: ldd `which mri_convert` and what OS is this installed on? On Tue, 2006-06-06 at 15:24 -0400, Joongnam Yang wrote: > I installed the new version of Freesurfer by downloading from Freesurfer > Wiki w

[Freesurfer] errors in library in new version of Freesurfer

2006-06-06 Thread Joongnam Yang
I installed the new version of Freesurfer by downloading from Freesurfer Wiki website. Then, I ran recon-all -subjid subjectname -autorecon1, and got the following library errors. Would someone suggest a solution? Nam. mri_convert: error while loading shared libraries: libgsl.so.0: cannot open s