Re: [Freesurfer] errors Quantifying Hippocampal Subfield Segmentations

2012-08-30 Thread Knut J Bjuland
Hi kvlQuantifyHippocampalSubfieldSegmentations.sh "expected that the "-hippo-subfields" flag has been used for each subject in $SUBJECTS_DIR; if this is not the case the "kvlQuantifyHippocampalSubfieldSegmentations.sh" script will fail and no (or incomplete) output files will be generated". f

[Freesurfer] errors Quantifying Hippocampal Subfield Segmentations

2012-08-30 Thread Carolina Valencia
Hi Freesurfer community: I run hippocampal subfields command succesfully recon-all -s CORBIC_vol15 finished without error at Thu Aug 30 11:29:16 COT 2012 done but when I run kvlQuantifyHippocampalSubfieldSegmentations.sh the terminal shows some errors: resultsDirectory /home/cvalencia/freesu