Re: [Freesurfer] Error with Hippocampal Subfields and Amygdala Nuclei

2018-06-21 Thread Andrea, Nicolas
acobs, Heidi Irma Louisa" Subject: Re: [Freesurfer] Error with Hippocampal Subfields and Amygdala Nuclei External Email - Use Caution Hi Nick, I believe Doug had a similar problem (atlas not flipping for right hippocampus) because he mixed versions of FreeSurfer. Your call is

Re: [Freesurfer] Error with Hippocampal Subfields and Amygdala Nuclei

2018-06-21 Thread Iglesias Gonzalez, Eugenio
ndrea, Nicolas" Reply-To: Freesurfer support list Date: Wednesday, 20 June 2018 at 21:09 To: "freesurfer@nmr.mgh.harvard.edu" Cc: "Jacobs, Heidi Irma Louisa" Subject: [Freesurfer] Error with Hippocampal Subfields and Amygdala Nuclei Hello, I am attempting to run two FS c

[Freesurfer] error with Hippocampal Subfields

2012-08-15 Thread Einav Sudai
Hi all, I'm running freesurfer ver 5.1 and I'm receiving an error with the command recon-all -s (subjid) -hippo-subfields. The log file terminates with the following information: Hippocampal Subfields processing Wed Aug 15 13:59:42 EDT 2012 mkdir -p /autofs/space/shimshon_002/users/eiran/subject