Re: [Freesurfer] error when using -hemi flag for recon -all command

2014-07-29 Thread Douglas N Greve
You have to tell it not to do all the operations after the per-hemi phase. At one point, it used to be easy to do this, but I don't think anyone ever used the per-hemi operations and now it might not be possible. doug On 07/29/2014 10:40 AM, C. Paula de los Angeles wrote: > Hi Freesurfer team,

[Freesurfer] error when using -hemi flag for recon -all command

2014-07-29 Thread C. Paula de los Angeles
Hi Freesurfer team, I am running into an issue when I am specify the -hemi flag for the recon -all command (in this case recon -all -hemi rh). The command seems to work for the most part, except it errored at the end and seemed to be looking for a file for the other hemisphere. How do I get this c