Re: [Freesurfer] error glm-fit-sim (message 11)

2018-10-10 Thread Greve, Douglas N.,Ph.D.
h.inflated:overlay=lh.area.glmdir/groupeffect/cache.th40.abs.sig.cluster.mgh:overlay_threshold=3,5:annot=lh.area.glmdir/groupeffect/cache.th40.abs.sig.ocn.annot > -viewport 3d > > The output: > > reading colortable from annotation file... > colortable with 1 entries r

Re: [Freesurfer] error glm-fit-sim (message 11)

2018-10-10 Thread Caroline Beelen
lize the data, but no clusters are found. Is this how it should be? Does it mean that there is a problem with reading colortables or not? Best, Caroline Message: 2 Date: Mon, 1 Oct 2018 17:10:28 + From: "Greve, Douglas N.,Ph.D." mailto:dgr...@mgh.harvard.edu>> Subject: Re

Re: [Freesurfer] error glm-fit-sim

2018-10-01 Thread Greve, Douglas N.,Ph.D.
What says that? What command are you running? What is the other terminal output? On 10/01/2018 04:54 AM, Caroline Beelen wrote: > > External Email - Use Caution > > Dear FS, > > I followed the group analysis page for glm analysis and it worked fine > until the final step. I’m using versi

[Freesurfer] error glm-fit-sim

2018-10-01 Thread Caroline Beelen
External Email - Use Caution Dear FS, I followed the group analysis page for glm analysis and it worked fine until the final step. I'm using version 5.3. After performing glm-fit-sim it says "glm-fit done" (for all files), but when trying to open these it says: "Reading colorta