Matt,
In v4.0, you can try the option -multistrip, which will attempt eight
different parameter settings running mri_watershed and will pick the best
one.
Nick
> Hello freesurfer gurus.
>
> Recently I was trying to do a fix on a brain that appeared to have a bad
> skull strip. The T1 was fine b
Hello freesurfer gurus.
Recently I was trying to do a fix on a brain that appeared to have a bad
skull strip. The T1 was fine but the brainmask volume came out almost
totally black, with the surfaces confined to some fuzziness in the corner
(appearing very strange in tkmedit). I attempted to fix
