Re: [Freesurfer] dmri_motion Error bvals

2014-02-06 Thread Liliana Maia
Hi anastasia, Thanks for your answer! I've already find where is my bug. I've downloaded other tracula update (Centos4). After I download Centos6, tracula runs without problems with the files used before. Thanks again No dia 6 de Fev de 2014 00:56, "Anastasia Yendiki" < ayend...@nmr.mgh.harvard.e

Re: [Freesurfer] dmri_motion Error bvals

2014-02-05 Thread Anastasia Yendiki
Hi Liliana - This error indicates that it could not find the /home/lapsi/test/bvals file at all, not that the file had the wrong format. Does that file exist? Also, if you run "trac-all -prep -noqa", you're telling trac-all NOT to do the QA step that calculates the motion measures, so I'm co

[Freesurfer] dmri_motion Error bvals

2014-01-22 Thread Liliana Maia
Hi, Within the new Tracula update and with outputs resulted from *trac-all -prep -noqa* I ran *: * *dmri_motion --out './test.txt' --dwi './dwi_orig.nii.gz' --bval './bvals' --mat './dwi.ecclog'* And an error message appears: *machine x86_64Output motion measure file: /home/lapsi/