Re: [Freesurfer] design matrix and contrast in fsgdf

2013-12-18 Thread Rujing Zha
Hi Doug, OK, I see. Thanks Doug. All the best. 2013-12-19 Rujing Zha 发件人:Douglas N Greve 发送时间:2013-12-19 04:38 主题:Re: [Freesurfer] design matrix and contrast in fsgdf 收件人:"Rujing Zha" 抄送:"freesurfer" yes On 12/17/2013 10:06 PM, Rujing Zha wrote: > Dear Doug, >

Re: [Freesurfer] design matrix and contrast in fsgdf

2013-12-18 Thread Douglas N Greve
-- > *发件人:*Douglas N Greve > *发送时间:*2013-12-18 00:31 > *主题:*Re: [Freesurfer] design matrix and contrast in fsgdf > *收件人:*"freesurfer" > *抄送:* > That looks correct. The contrasts for the 2nd example will test whether > the score is equal to 0 or not

Re: [Freesurfer] design matrix and contrast in fsgdf

2013-12-17 Thread Rujing Zha
r not". Am I right? Thanks. All the best. 2013-12-18 Rujing Zha 发件人:Douglas N Greve 发送时间:2013-12-18 00:31 主题:Re: [Freesurfer] design matrix and contrast in fsgdf 收件人:"freesurfer" 抄送: That looks correct. The contrasts for the 2nd example will test whether the score is equal

Re: [Freesurfer] design matrix and contrast in fsgdf

2013-12-17 Thread Douglas N Greve
That looks correct. The contrasts for the 2nd example will test whether the score is equal to 0 or not (and not an interaction between diagnosis and score). It is not wrong, but I just wanted to make sure you know what you are testing. doug On 12/17/2013 01:50 AM, Rujing Zha wrote: > Dear al

[Freesurfer] design matrix and contrast in fsgdf

2013-12-16 Thread Rujing Zha
Dear all, I want to design a group t-test analysis and correlation analysis for pial thickness. I have read the PPT of freesurfer.groupanalysis, and I wrote a specific design matrix and contrast for my data. However it is the first time that I design matrix in fsgdf by freesurfer. I didnot confi