Re: [Freesurfer] couple TRACULA questions

2015-07-09 Thread Anastasia Yendiki
Hi Michael - It's possible, I'm taking last minute feature requests. The more the release is delayed the more likely it is to accommodate them! I'm on vacation for the next 10 days but will look into this when I'm back. a.y On Tue, 7 Jul 2015, Harms, Michael wrote: > > Hi Anastasia, > Will th

Re: [Freesurfer] couple TRACULA questions

2015-07-07 Thread Harms, Michael
Hi Anastasia, Will the next version of TRACULA support the use of 'topup' and 'eddy' by any chance? thanks, -MH -- Michael Harms, Ph.D. --- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Depa

Re: [Freesurfer] couple TRACULA questions

2015-07-06 Thread Anastasia Yendiki
Forgot to reply re: merging. You have to merge them yourselves, sorry. On Mon, 6 Jul 2015, Harms, Michael wrote: Hi Anastasia, We are looking at running TRACULA on some data, where we were attracted by the longitudinal component of TRACULA.  Is a paper on the longitudinal aspect of TRACULA i

Re: [Freesurfer] couple TRACULA questions

2015-07-06 Thread Anastasia Yendiki
Hi Michael - Thanks for finding longitudinal tracula attractive! :) The paper is under review. There's an ISMRM abstract that I can send you. About the cluster customization: bedpostx_mgh and fsl_sub_mgh are supersets of bedpostx and fsl_sub, so they have all the original functionality of th

[Freesurfer] couple TRACULA questions

2015-07-06 Thread Harms, Michael
Hi Anastasia, We are looking at running TRACULA on some data, where we were attracted by the longitudinal component of TRACULA.  Is a paper on the longitudinal aspect of TRACULA in the works? If we have multiple dMRI runs/series per imaging session, do we need to merge/concatenate thos