d.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Wednesday, February 10, 2016 6:13 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] comparing multiple runs on the same scan
That probably means that there is something in the header
45 PM
>> To: Freesurfer support list
>> Subject: Re: [Freesurfer] comparing multiple runs on the same scan
>>
>> Hi Don
>>
>> are you saying the 001.mgz is different when created from the same dicom
>> data? Can you run mri_diff on it to see what the
-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-
boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl
Sent: Wednesday, February 10, 2016 3:45 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] comparing multiple runs on the same scan
Hi Don
are you saying the 001.mgz is different when created fro
Fischl
> Sent: Wednesday, February 10, 2016 3:45 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] comparing multiple runs on the same scan
>
> Hi Don
>
> are you saying the 001.mgz is different when created from the same dicom
> data? Can you run mri_di
Hi Don
are you saying the 001.mgz is different when created from the same dicom
data? Can you run mri_diff on it to see what the difference is?
cheers
Bruce
On Wed, 10
Feb 2016, Krieger, Donald N. wrote:
We would like to confirm that we are getting identical results from multiple
freesurf
support list
Subject: Re: [Freesurfer] comparing multiple runs on the same scan
Doug responded to your previous mail with this:
Even on the same operating system they will be different because there
is stuff in the header that will change. Use mri_diff (volumes,
segmentations, and surface overlays
Doug responded to your previous mail with this:
Even on the same operating system they will be different because there
is stuff in the header that will change. Use mri_diff (volumes,
segmentations, and surface overlays) or mris_diff for surfaces to check
whether they are different.
hth
d
On We
We would like to confirm that we are getting identical results from multiple
freesurfer runs on the same data set.
To do so we are comparing identically named files using md5sum and would very
much appreciate your thoughts on our results. For multiple files, we
concatenate them and pipe the out
