Re: [Freesurfer] cannot find eddy_correct

2013-02-05 Thread Anastasia Yendiki
In general the FSLDIR variable needs to be set up for freesurfer scripts to find FSL executables. Others on the list will be more qualified than me to address the VM aspects of this. On Tue, 5 Feb 2013, Varghese Chikku wrote: Hi Anastasia, First of all,thanks  for your mail and  forgive my

Re: [Freesurfer] cannot find eddy_correct

2013-02-04 Thread Anastasia Yendiki
Yes. On Mon, 4 Feb 2013, Varghese Chikku wrote: Dear Team,    I tried to run dt_recon and  the  systems says  cannot find eddy_correct,Make  sure FSL is installed. So ,do I need to  install the whole FSL package to run this. In Thanks Chikku ___ Fre

[Freesurfer] cannot find eddy_correct

2013-02-04 Thread Varghese Chikku
Dear Team, I tried to run dt_recon and the systems says *cannot find eddy_correct,Make sure FSL is installed*. So ,do I need to install the whole FSL package to run this. In Thanks Chikku ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu