Re: [Freesurfer] calculating DLPFC or frontal lobe grey and white matter volumes

2012-03-26 Thread Douglas N Greve
Try this cd $SUBJECTS_DIR/subject mri_aparc2aseg --s subject --labelwm --hypo-as-wm --rip-unknown --volmask --o mri/wmparc.a2009s.mgz --a2009s --ctxseg aparc.a2009s+aseg.mgz mri_segstats --seg mri/wmparc.a2009s.mgz --sum stats/wmparc.a2009s.stats --pv mri/norm.mgz --excludeid 0 --brain-vol-

[Freesurfer] calculating DLPFC or frontal lobe grey and white matter volumes

2012-03-22 Thread sam bedford
Dear All We want to find frontal lobe grey and white matter volumes in a patient group to compare it with control group. In particular, we want to see the grey and white matter volumes in the dorsolateral prefrontal cortex (DLPFC). However we seem to be