Re: [Freesurfer] binary noise regressor

2015-05-06 Thread SHAHIN NASR
Hi Doug, Sorry to interrupt you again with this topic. Don't you think, to regress out my unwanted event (eletric shock), I need to convolv this event with the hrf model and then use the outcome as my regressor? Regards On Fri, May 1, 2015 at 12:23 PM, Douglas Greve wrote: > I don't necess

Re: [Freesurfer] binary noise regressor

2015-05-01 Thread Douglas Greve
I don't necessarily think the exclude file is a better approach. What you are doing is probably fine. doug On 5/1/15 12:12 PM, sha...@nmr.mgh.harvard.edu wrote: > Hi Doug, > The reason that we did not use that 'exclusion method' was that, we > were not sure if the effect of shock is limited t

Re: [Freesurfer] binary noise regressor

2015-05-01 Thread Douglas Greve
That will do what you want if you expect the shock to have the same response to each application. Alternatively, you can set up a time point exclude file to exclude those time points. If you use this, then create the file by putting the time in seconds of the time points you want to exclude. do

[Freesurfer] binary noise regressor

2015-05-01 Thread SHAHIN NASR
Hi Surfers I want to remove the possible effects of a binary noise (electric shock) from the evoked fMRI. To do so, I have generated a regressor file in which all TRs in which electric shock has been applied are marked as 1 and the rest of TRs are 0. I just want to be sure that, this is all I