Re: [Freesurfer] aparc2feat and using Freesurfer Lookup Table

2011-09-29 Thread Bruce Fischl
Hi Michelle, we don't currently label V3d automatically. cheers Bruce On Thu, 29 Sep 2011, Michelle Umali wrote: Dear Freesurfers, I wanted to generate binary masks for areas found in the Freesurfer Color Lookup Table. For  example, I wanted to use number 433, the Visual_V3d_l.  I tried to

[Freesurfer] aparc2feat and using Freesurfer Lookup Table

2011-09-29 Thread Michelle Umali
Dear Freesurfers, I wanted to generate binary masks for areas found in the Freesurfer Color Lookup Table. For example, I wanted to use number 433, the Visual_V3d_l. I tried to use aseg2feat -feat featdir --aseg aparc+aseg fslmaths -featdir/reg/freesurfer/aparc+ aseg.nii.gz -thr 433v uthr 433 \