See
http://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat
On 09/11/2014 05:12 AM, Gabor Perlaki wrote:
> Dear all,
>
> I'd like to convert the aparc+aseg.mgz to nifti and use it in the
> space of the original MR image. The basic conversion from mgz to nifti
> works fine "mri_convert apa
Hi Gabor
try adding:
-odt int
to the mri_convert command line. Because the rawavg.mgz is type uchar it
wants to convert to uchar otherwise, which is messing things up.
cheers
Bruce
On Thu, 11 Sep 2014, Gabor
Perlaki wrote:
> Dear all,
>
> I'd like to convert the aparc+aseg.mgz to nifti and
Dear all,
I'd like to convert the aparc+aseg.mgz to nifti and use it in the space of
the original MR image. The basic conversion from mgz to nifti works fine
"mri_convert aparc+aseg.mgz aparc+aseg.nii". However if I reslice it in the
space of the original MRI than something fails and even negative
