Re: [Freesurfer] anonymizing dicom files

Hi Inge, here is a WEB page for BIRNDUP distribution. http://wiki.na-mic.org/Wiki/index.php/MBIRN:BIRNDUP:Distribution Silvester > Hi Inge, > > no, certainly not all the info in the dicoms is preserved (there's a > ton), and patient name is not. We have an anonymization procedure that > we've

Re: [Freesurfer] anonymizing dicom files

Hi Inge, no, certainly not all the info in the dicoms is preserved (there's a ton), and patient name is not. We have an anonymization procedure that we've developed through the morphometry birn that both fuzzifies dates and such in the patient header and removed identifying features in the MRI

Re: [Freesurfer] anonymizing dicom files

Is all info from the the dicom headers included in the mgz's throughout the processing stream (eg. Patientname and such)? Najmeh: Have you found a solution for anonymizing dicoms you are satified with? Thanks Inge Amlien > > sorry about nonstop posting! > > I'm trying to remove the patient name

Re: [Freesurfer] anonymizing dicom files

You're absolutely right - the siemens mosaic files return an error in mri_convert after osirix anonymises them, while the single siemens files do not. We've been using mri_convert for siemens DTI data, so weren't playing with mosaics.The dicom-rewriter plugin for ImageJ worked fine.On 29/08/2006, a

Re: [Freesurfer] anonymizing dicom files

Can't say we've had this problem when we select only the patient's name field for anonymising in the preferences. Will check again later today!On 29/08/2006, at 7:54 AM, Doug Greve wrote: We've had some problems with osirix in that it will strip off all the private fields. For siemens mosaics, the

Re: [Freesurfer] anonymizing dicom files

We've had some problems with osirix in that it will strip off all the private fields. For siemens mosaics, these are necessary in order to determine the number of slices and the image positions, etc. Greig de Zubicaray wrote: There's also Osirix on the Mac: http://homepage.mac.com/ross

Re: [Freesurfer] anonymizing dicom files

There's also Osirix on the Mac:http://homepage.mac.com/rossetantoine/osirix/Index2.htmland ImageJ has a plugin:http://rsb.info.nih.gov/ij/plugins/dicom-rewriter.htmlHaven't used the latter, but can vouch for the former!regards,GreigOn 29/08/2006, at 6:16 AM, Russ Poldrack wrote:You can use the LONI

Re: [Freesurfer] anonymizing dicom files

there is a package for subject deidentification, which contains also DICOM anonymizing. http://www.na-mic.org/Wiki/index.php/MBIRN:BIRNDUP:Distribution or another program for DICOM anonymizing: http://eng.neologica.it/download/downloadDICOMAnonymizer.html Silvester Najmeh Khalili M. wrote

Re: [Freesurfer] anonymizing dicom files

You can use the LONI deidentification debablet to do this:http://www.loni.ucla.edu/Software/Software_Detail.jsp?software_id=23cheersrussOn Aug 28, 2006, at 1:07 PM, Doug Greve wrote:Sorry, no clue.Najmeh Khalili M. wrote: sorry about nonstop posting!I'm trying to remove the patient names from dicom

Re: [Freesurfer] anonymizing dicom files

Sorry, no clue. Najmeh Khalili M. wrote: sorry about nonstop posting! I'm trying to remove the patient names from dicom files. I was advised to use dcm_modify_elements but it fails on DCM_Openfile. Is there a straight forward way of doing this? Thanks Naj P.S. Doug, I am still looking fo

[Freesurfer] anonymizing dicom files

sorry about nonstop posting! I'm trying to remove the patient names from dicom files. I was advised to use dcm_modify_elements but it fails on DCM_Openfile. Is there a straight forward way of doing this? Thanks Naj P.S. Doug, I am still looking for the graddir tags :)