Re: [Freesurfer] annotation file to MNI space

2012-03-30 Thread Douglas N Greve
What do you mean you were unsuccessful? Try using --reg $FREESURFER_HOME/average/mni152reg.dat instead of --identity On 03/30/2012 08:06 AM, Yolanda Vives wrote: > Dear Freesurfer experts, > I would like to transform the aparc.annot file into MNI space in order > to map the parcels from this file

[Freesurfer] annotation file to MNI space

2012-03-30 Thread Yolanda Vives
Dear Freesurfer experts, I would like to transform the aparc.annot file into MNI space in order to map the parcels from this file to the MNI152_T1_1mm atlas. I have tried the following unsuccessfully: ./mri_label2vol --annot lh.aparc.annot --subject fsaverage --temp ./fsaverage/mri/brainmask.mgz