Re: [Freesurfer] after mri_glmfit whats next

2010-05-11 Thread Douglas N Greve
You could do a couple of things. You could concat (mri_concat) the talairach maps together and do a group analysis on the FA. This is not a super-great way to go because the talairach registration will mix white matter with the gray matter. Alternatively, you can do a region-of-interest analys

[Freesurfer] after mri_glmfit whats next

2010-05-09 Thread Samantha Clark
Hi Doug, I did the first level analysis for my DTI data per the tutorial mri_glmfit --y group-fa-tal.nii --mask group-mask-tal.nii\ --fsgd your.fsgd --C contrast --glmdir groupanadir Not sure how to proceed from here to view the regions that are statistically signifiant. Can you help? Tha