Re: [Freesurfer] Watershed gca atlas

Hi Vincent look all algorithms, sometimes that piece fails, particularly if the anatomy in question is an outlier. cheers Bruce On Sat, 24 Mar 2012, Vincent wrote: I noticed in this skull strip tutorial that sometimes when adjusting the watershed threshold the -no-wsgcaatlas option is use

[Freesurfer] Watershed gca atlas

I noticed in this skull strip tutorial that sometimes when adjusting the watershed threshold the -no-wsgcaatlas option is used. I understand that it means that the atlas, which is used to assist in detecting physical features whil