You can use mri_surf2surf to map annotations, or you can use
mri_annotation2label to convert the annot to labels, then use
mri_label2label.
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
> Doug,
>
> I have a follow-up to this question that I asked a while back. The cluster
> correction only outpu
Doug,
I have a follow-up to this question that I asked a while back. The cluster
correction only outputs a .annot file, not label files, which doesn't seem to
work with mri_label2label. Is there a way around this? Thanks,
Nathan
On 11/9/09 12:20 PM, "Douglas N Greve" wrote:
Use mri_label
Use mri_label2label to map from one subject to another. See the help for
how to do this. then
cd subject/surf
mris_anatomical_stats -l yourlabel.label -t lh.thickness -f table.dat
subject lh
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
> Doug,
>
> I'm mostly looking to pull out cortical thicknes
Doug,
I'm mostly looking to pull out cortical thickness. Could you give me an
example of the command line which I would use to map the labels back to the
individual subjects and pull the stats? Thanks,
Nathan
On 11/9/09 12:03 PM, "Douglas N Greve" wrote:
what kind of stats? It will create
what kind of stats? It will create labels of the clusters, and you can
map those labels back to the individual subjects, then run
mris_anatomical_stats to pull out, eg, thickness for each subject.
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
> Hello all,
>
> I sent this last week but I think it m
Hello all,
I sent this last week but I think it may have slipped through the cracks.
I have recently run a cluster correction on some data, and was hoping to use
these clusters as ROIs and pull stats from them. What is the best way to do
so? Thank you in advance for your help,
Nathan
__
Hello all,
I have recently run a cluster correction on some data, and was hoping to use
these clusters as ROIs and pull stats from them. What is the best way to do
so? Thank you in advance for your help,
Nathan
___
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