Re: [Freesurfer] Unpacking DWI Data

2016-09-18 Thread Emily Louise Belleau
Got it, this is fantastic, thanks! Emily From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Barbara Kreilkamp Sent: Sunday, September 18, 2016 5:54:48 PM To: Freesurfer support list Subject: Re: [Freesurfer] Unpacking DWI Data Hi Emily, Yes

Re: [Freesurfer] Unpacking DWI Data

2016-09-18 Thread Barbara Kreilkamp
*From:* freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Barbara Kreilkamp *Sent:* Sunday, September 18, 2016 3:21:00 PM *To:* Freesurfer support list *Subject:* Re: [Freesurfer] Unpacking DWI Data Hi Emily, I've never tried t

Re: [Freesurfer] Unpacking DWI Data

2016-09-18 Thread Emily Louise Belleau
From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Barbara Kreilkamp Sent: Sunday, September 18, 2016 3:21:00 PM To: Freesurfer support list Subject: Re: [Freesurfer] Unpacking DWI Data Hi Emily, I've never tried to use unpacksdcmdir but you may try the Osirix tool, it allows y

Re: [Freesurfer] Unpacking DWI Data

2016-09-18 Thread Barbara Kreilkamp
Hi Emily, I've never tried to use unpacksdcmdir but you may try the Osirix tool, it allows you to read in a dicom folder and save a new folder with subfolders according to the sequences that were run. At the same time you can also anonymize your data. Does this help? Best wishes, Barbara

[Freesurfer] Unpacking DWI Data

2016-09-17 Thread Emily Louise Belleau
Hello Freesurfer Experts, Our research team has recently collected data from Martinos Center. The entire scanning protocol (including anatomical, functional runs, DWI) is in one directory. Therefore I have been using unpacksdcmdir to tell me what runs go with each scanning sequence. I have h