: [Freesurfer] Troubleshooting "could not open file" errors in FS 5.3
External Email - Use Caution
Hi Annchen,
freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 has a release date of May
2013. All your individual programs reported BuildTimeStamp: Dec 19 2017
00:02:05.
H
path to recon-all if Freesurfer
environment is set up correctly)
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Annchen Knodt
Sent: Sunday, June 4, 2023 9:22 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Troubleshooting "could not open file" errors
ng, Yujing
Sent: Friday, June 2, 2023 4:23 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Troubleshooting "could not open file" errors in FS 5.3
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I followed 5.3 recon-all a little bit. rh will be processed after lh. Your
recon-all stoppe
reesurfer support list
mailto:freesurfer@nmr.mgh.harvard.edu>>
Subject: Re: [Freesurfer] Troubleshooting "could not open file" errors in FS 5.3
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Hi Yujing,
Thanks so much for your response! I tried copying
$FREESURFER_HOME/subjects/fsaverage
original?
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Annchen Knodt
Sent: Friday, June 2, 2023 2:53 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Troubleshooting "could not open file" errors in FS 5.3
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Hi Yujing,
@nmr.mgh.harvard.edu
Subject: [Freesurfer] Troubleshooting "could not open file" errors in FS 5.3
External Email - Use Caution
Hello,
I'm trying to run freesurfer v5.3 recon-all and running into an error I'm not
sure how to troubleshoot. I'm using essentially the same command
