n still process your DWIs with the new
version of TRACULA.
Best,
Anastasia.
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Jacoby, John
Sent: Thursday, September 16, 2021 2:16 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] TRACULA mri_c
Hi all,
I'm running TRACULA preprocessing in FreeSurfer 6.0 and have run into an error.
It looks like it might be caused by TRACULA calling mri_convert with the input
as the whole DICOM root directory, as opposed to an individual file. I'm not
sure what's going wrong that leads to that happenin
Can you send the full terminal output?
doug
On 11/24/14 10:18 PM, Janosch Linkersdörfer wrote:
> Hi experts,
>
> I wanted to play with Tracula. Strangely, already the first preprocessing
> step, i.e., conversion to .nii.gz, fails.
>
> Apparently, mri_convert (falsely) recognizes my dicom files a
Hi experts,
I wanted to play with Tracula. Strangely, already the first preprocessing step,
i.e., conversion to .nii.gz, fails.
Apparently, mri_convert (falsely) recognizes my dicom files as MGH dicoms
("This looks like an MGH DTI volume"). Could this be the reason why it fails?
Thanks,
Janos
