Re: [Freesurfer] Tracula: cannot open file `1000' for reading Bedpost file error

2015-05-22 Thread Anastasia Yendiki
Hi Katherine - Is your gradient table in 3-row format by any chance? This only works with the tracula update that was posted after the freesurfer 5.3 release. If you reinstalled freesurfer (as you mentioned earlier) you might have overwritten the update, in which case the row-formatted gradien

Re: [Freesurfer] Tracula: cannot open file `1000' for reading Bedpost file error

2015-03-30 Thread Katherine Damme
Hello Anastasia, I did specify the files. I used the same config file (attached) a few months ago to write make a tracula image and then the dpath was deleted by mistake and when I tried to rerun the same file it is giving me this error. On Fri, Mar 6, 2015 at 6:07 PM, Anastasia Yendiki < ayend...

Re: [Freesurfer] Tracula: cannot open file `1000' for reading Bedpost file error

2015-03-06 Thread Anastasia Yendiki
Hi Katherine - Did you specify the gradient table and b-value table in your configuration file? I suspect that the issue is that it can't find them. a.y On Tue, 3 Mar 2015, Katherine Damme wrote: > Hello Freesurfers, > > I recently updated my Freesurfer version and now I am getting an error

[Freesurfer] Tracula: cannot open file `1000' for reading Bedpost file error

2015-03-03 Thread Katherine Damme
Hello Freesurfers, I recently updated my Freesurfer version and now I am getting an error in tracula. awk: cmd. line:1: fatal: cannot open file `1000' for reading (No such file or directory) Any help would be appreciated. trac-all.error Description: Binary data Mon Mar 2 18:24:56 CST 2015 /ho