Hi Bruce and Louis,
Thank you for the suggestions. I will try them out.
Just fyi. For our dataset this error is very rare. So far it occured only
in 1 out of 525+ scans processed with FS 5.1.
Thank you,
Mehul
On Tue, Nov 1, 2011 at 6:50 AM, Louis Nicholas Vinke <
vi...@nmr.mgh.harvard.edu> wro
Hi Mehul,
Alternatively you can try rerunning the skullstrip step, sometimes this
works as well.
recon-all -skullstrip -autorecon2 -autorecon3 -s [SubjID]
-Louis
On Tue, 1 Nov 2011, Bruce Fischl wrote:
Hi Mehul
this is a bug in the topology correction that we haven't been able to track
do
Hi Mehul
this is a bug in the topology correction that we haven't been able to
track down, mainly because the person who wrote this piece is long gone. If
you edit the wm to remove a defect it usually goes away
Bruce
On
Mon, 31 Oct 2011, Mehul Sampat wrote:
Hi Folks
I am using Freesurfe
Hi Folks
I am using Freesurfer 5.1 and I get the following error: "ERROR:
_FindFacePath: could not find path!"
Is this is a memory related issue ? The same case went through smoothly
with Freesurfer 5.0.
Also I have not seen this error over a large number of subjects and I
thought it might be
Hi
you probably ran out of memory. That's a giant defect so something is
badly wrong. Check to make sure that the hemis are separated and that the
skull and cerebellum aren't attached
Bruce
On Wed, 26 Oct 2011, Sindhuja Tirumalai
Govindarajan wrote:
> Hi all,
>
> I got the following error whil
Hi all,
I got the following error while running recon-all on a patient dataset.
Kindly let me know how to proceed.
Thanks!
Sindhuja
Correction of the Topology
Finding true center and radius of Spherical Surface...done
Surface centered at (0,0,0) with radius 100.0 in 13 iterations
marking ambigu
