Re: [Freesurfer] Thickness group normalization

?​ ​ *От:* freesurfer-boun...@nmr.mgh.harvard.edu от имени Vyacheslav Yarkin *Отправлено:* 5 февраля 2020 г. 11:47 *Кому:* Freesurfer support list *Тема:* Re: [Freesurfer] Thickness group normalization External Email - Use Caution I got the

Re: [Freesurfer] Thickness group normalization

: Freesurfer support list Тема: Re: [Freesurfer] Thickness group normalization External Email - Use Caution I got the idea but faced an issue with mris_preproc, the command is: mris_preproc --target 0_1 --s avg_subject_91_noexpopts --hemi lh --meas thickness --out avg_91_to_lh.mgh

Re: [Freesurfer] Thickness group normalization

: freesurfer@nmr.mgh.harvard.edu Тема: Re: [Freesurfer] Thickness group normalization Do you have a group of subjects that you want to use as an average? If so, you can just map all their thickness maps to your patient subject with mris_preproc --target patientsubjectname [then usual arguments

Re: [Freesurfer] Thickness group normalization

Do you have a group of subjects that you want to use as an average? If so, you can just map all their thickness maps to your patient subject with mris_preproc --target patientsubjectname [then usual arguments] Compute the mean with mri_concat outputofmris_preproc.mgz --mean --o groupmean.mgz Yo

[Freesurfer] Thickness group normalization

External Email - Use Caution Hello Freesurfer Team, Would you be so kind to provide freesurfer steps to implement warping fsaverage mean thickness data on individual subject inflated brains ? I am using expert opts to disable cortical thickness restriction, and set mris_thickne