[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl
Sent: Tuesday, July 29, 2014 1:35 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] The difference between wm.mgz and wm.seg.mgz
Hi Mohamad
the wm.seg.mgz is the output of mri_segment and is a voxel segmentation that
considers
Hi Mohamad
the wm.seg.mgz is the output of mri_segment and is a voxel segmentation
that considers local intensities and estimated cortical geometry, but not
topology. mri_pretess then takes the wm.seg.mgz and removes certain
pathological voxel configurations (like corners touching) that mess u
Dear Fs Experts,
What is the difference between (wm.mgz and wm.seg.mgz)_ in the output of
recon-all? i.e is wm.mgz means the whole white matter (right_left hemispheres
and brain stem except the cerebellum)
Thanks
Mohamad
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