Re: [Freesurfer] Thalamus Parcellation - HCP data

Dear Asa, Rather than resampling to 2mm and then applying a linear transform, I would first transform and then resample. Cheers, Juan Eugenio Iglesias www.jeiglesias.com On Aug 9, 2022, at 3:32 PM, Asa Borzabadi Farahani mailto:asa.borzabadifarah...@mail.mcgill.ca>

[Freesurfer] Thalamus Parcellation - HCP data

External Email - Use Caution Hi, I hope this email finds you all well. I have a basic question about the right way of using ThalamicSegmentation method ( implemented by Iglesias et al. 2018). I plan to use this subject-specific atlas on the data processed via the HCP pipeline.