Re: [Freesurfer] Talairach coordinate discrepancy mri_surfcluster vs tksurfer

2015-04-02 Thread Douglas N Greve
I think it is just that tksurfer reports coordinates from the orig surface whereas the cluster summary reports coordinates from the white surface. We some how never got around to fixing this in tksurfer. doug On 04/02/2015 10:18 AM, Alexandra Tanner wrote: > Hi Doug and Freesurfers, > > I ran m

[Freesurfer] Talairach coordinate discrepancy mri_surfcluster vs tksurfer

2015-04-02 Thread Alexandra Tanner
Hi Doug and Freesurfers, I ran mri_surfcluster to generate coordinates for cluster maxima from a functional surface analysis. The summary text file generated by mri_surfcluster lists a bunch of information about the clusters, including talairach coordinates for each cluster peak (see example below