Re: [Freesurfer] TRACULA NaN values in stats files and empty stats file

2015-12-15 Thread Anastasia Yendiki
Hi Deniz - It sounds like the reconstruction for this particular tract and subject may have failed. You can try reinitializing it by using the reinit variable in your configuration file (search reinit in the freesurfer email list archives for previous posts on this). If you try that and the er

[Freesurfer] TRACULA NaN values in stats files and empty stats file

2015-11-19 Thread denizzgursel
Dear Tracula users, I reconstructed uncinate fasciculus using the latest version of Freesurfer and Tracula. However, there seems to be a problem with produced stats files ​ in dpath folder​ . I have -nan values for the center_avg variables in the file "pathstats.overall.txt" ​ and there is no ent