Re: [Freesurfer] TAL QA check failed

2009-06-08 Thread Douglas N Greve
Yea, as the error message says, you should check out the web page, it will give you all the instructions you need. doug Barnali Basu wrote: No. Do I need to look at it with tkregister? On Mon, Jun 8, 2009 at 5:05 PM, Douglas N Greve mailto:gr...@nmr.mgh.harvard.edu>> wrote: did the you

Re: [Freesurfer] TAL QA check failed

2009-06-08 Thread Barnali Basu
No. Do I need to look at it with tkregister? On Mon, Jun 8, 2009 at 5:05 PM, Douglas N Greve wrote: > did the you look at the registration? > > Barnali Basu wrote: > >> Experts, >> >> I got the following error while running a subject with recon-all >> autorecon1 >> >> >> ERROR: Talairach QA check

Re: [Freesurfer] TAL QA check failed

2009-06-08 Thread Douglas N Greve
did the you look at the registration? Barnali Basu wrote: Experts, I got the following error while running a subject with recon-all autorecon1 ERROR: Talairach QA check failed! z-score = -8 <= -4 = threshold Manual Talairach alignment may be necessary, or include the -notal-check fla

[Freesurfer] TAL QA check failed

2009-06-08 Thread Barnali Basu
Experts, I got the following error while running a subject with recon-all autorecon1 ERROR: Talairach QA check failed! z-score = -8 <= -4 = threshold Manual Talairach alignment may be necessary, or include the -notal-check flag to skip this test. See http://surfer.nmr.mgh.harvard.edu/fswi