ster --mov mgz/7T_MEMPRAGE.mgz --init-reg
> 7Tto3Tinit.lta --reg 7Tto3T.lta --o 7TMEMPRAGE_warped.mgz --t1 --s 126346
> ...
> Loading mov
> error:
> mghRead(/home/mtisdall/Research/7TAnalysis/subjects/subject-unknown/mri/orig.mgz,
> -1): could not open file
>
>
> Any
s N. Greve"
> Subject: Re: [Freesurfer] Subject ID error with bbregister
> To: freesurfer@nmr.mgh.harvard.edu
> Message-ID: <6f0565c8-c4f3-8289-d41b-0558a1fb6...@mgh.harvard.edu>
> Content-Type: text/plain; charset=UTF-8; format=flowed
>
> Is there a blank subject line
Is there a blank subject line in the lta file? If so, it is probably
trying to get the subject from there. You can try putting the --s after
the --lta
On 2/21/2022 3:43 PM, Tisdall, Dylan wrote:
> External Email - Use Caution
>
> Hi all,
>
> Quick question on a puzzling error with bbreg
External Email - Use Caution
Hi Dylan,
I call bbregister with --s in the same place you have it. Is it possible there
is something wrong with $SUBJECTS_DIR when you are calling bbregister?
Matt.
On 2/21/22, 2:43 PM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf of
Tisdall
External Email - Use Caution
Hi all,
Quick question on a puzzling error with bbregister version 7.1.1. When I run:
bbregister --s 126346 --mov mgz/7T_MEMPRAGE --init-reg 7Tto3Tinit.lta --reg
7Tto3T.lta --o 7TMEMPRAGE_warped.mgz --t1
I get the error:
ERROR: must spec a subject
