Re: RV: Re: [Freesurfer] Spherical ROIs areas in the fsaverage

2007-09-14 Thread Bruce Fischl
Hi Jorge, the fsaverage subject has less surface area than any of the individuals. We typically correct for this by including the average surface area in the surfaces created by make_average_subject. For example: mris_info ~/local_subjects/fsaverage/surf/lh.white reading group avg surface ar

RV: Re: [Freesurfer] Spherical ROIs areas in the fsaverage

2007-09-13 Thread jorge luis
Ok, but my automatic procedure constructed the ROI masks on the lh.sphere (not on lh.sphere.reg)of the fsaverage subject. Is it wrong to compute the area of a ROI in the fsaverage spherical surface by adding the areas of the triangular faces inside this region? (The area of each triangular face be

Re: [Freesurfer] Spherical ROIs areas in the fsaverage

2007-09-12 Thread Bruce Fischl
Hi Jorge, the ?h.sphere is the metrically optimal surface, but after spherical registration, the ?h.sphere.reg has a fair amount of metric distortion, which is necessary to align folds cheers, Bruce On Wed, 12 Sep 2007, jorge luis wrote: Hello all I have made changes in the thickness value

[Freesurfer] Spherical ROIs areas in the fsaverage

2007-09-12 Thread jorge luis
Hello all I have made changes in the thickness values in some regions of a left hemisfere of a subject surface after mapped it onto the fsaverage sphere. The changes were made to have areas close to these in the left colum of the following table: My area Freesurfer number of vertices