Re: [Freesurfer] Smoothing of functional data mapped onto the fsaverage surface

2015-09-08 Thread Douglas N Greve
What are you using to do the functional analysis? In general, use mri_surf2surf to do the smoothing (or mris_fwhm). cesvar.nii.gz is something produced by FAFAST. If you are not using FSFAST then you'll have to find the equivialent (it is the variance of the contrast, VARCOPE in FSL I think) O

[Freesurfer] Smoothing of functional data mapped onto the fsaverage surface

2015-09-08 Thread Silas
Dear Freesurfer, 1) I would like to investigate the possible outcomes of my functional group analysis after smoothing with 5 FWHM and 10 FWHM. My functional data is already mapped onto the fsaverage. Which command would you suggest for smoothing this data? 2) In the functional group analysis tut