Re: [Freesurfer] Small volume correction in qdec

2014-05-19 Thread Douglas N Greve
It is not possible in qdec. You will have to use mri_glmfit passing the label with the --label flag, then create your own tables for the correction for multiple comparisons using mri_mcsim, then use mri_glmfit-sim. There is more info here http://surfer.nmr.mgh.harvard.edu/fswiki/BuildYourOwnMo

[Freesurfer] Small volume correction in qdec

2014-05-16 Thread Narly Golestani
Dear all, I would like to follow up on several posts that have already been made regarding how to restrict the search volume (i.e. do a small volume correction) to a particular region (e.g. to a freesurfer label) within qdec. As far as I can see this query was not answered on the list: https