Hi Ben,
do the images appear in the right orientation in tkmedit? How did you
convert to .mgz? If they are in the correct orientation then feel free to
drop an example that isn't working on our website and we'll take a look.
cheers,
Bruce
On
Tue, 28 Apr 2009, Wilson, Benjamin wrote:
Hi,
Hi,
I am trying to run freesurfer on some SPGR sequences that I have on a few
subjects. I managed to import and convert the DICOM files to .mgz with
success, but when I ran the skull strip I have a significant amount of skull
left in some places and a large chunk of brain missing in other plan
check to see if your talairach is ok
On Wed, 29 Nov 2006, XJ Kang wrote:
Hi,
I got the following message when doing the skull strip:
*WATERSHED**
preflooding height equal to 25 percent
Sorting...
T1-weighted MRI image
modification of the
Hi,
I got the following message when doing the skull strip:
*WATERSHED**
preflooding height equal to 25 percent
Sorting...
T1-weighted MRI image
modification of the preflooding height to 15 percent
Count how many 110 voxels are prese
