Re: [Freesurfer] See masked area in freeview

That is not an annotation file. Try the one with .annot suffix. Ruopeng On Aug 31, 2021, at 12:07 PM, Haley Park mailto:hpar...@gmail.com>> wrote: External Email - Use Caution Thank you! When I tried that I get a series of error messages like this: MRISreadAnnotationIntoArray: vertex

Re: [Freesurfer] See masked area in freeview

External Email - Use Caution Thank you! When I tried that I get a series of error messages like this: MRISreadAnnotationIntoArray: vertex index out of range: 1948771661 i=0003746D, in_array_size=163842 annot file: /Applications/freesurfer/7.1.1/subjects/fsaverage/label/lh.Yeo

Re: [Freesurfer] See masked area in freeview

You can load them as annotations in freeview along with your overlay. Change the z-order of the overlay to be larger than the annotation so that the overlay will be displayed on top of the annotation. Ruopeng On Aug 31, 2021, at 10:16 AM, Haley Park mailto:hpar...@gmail.com>> wrote:

[Freesurfer] See masked area in freeview

External Email - Use Caution Hello, I did a correlation analysis and see the significant areas in freeview when I run freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:overlay=cache.th20.abs.sig.cluster.mgh However, I would like to see whether the significant areas are a par