Hi Catherine,
it shouldn't be necessary, but you should be very careful that any
effects you find are biological ones and don't simply reflect acquisition
differences.
cheers
Bruce
On Wed, 14 Dec 2011, Cat Chong wrote:
Dear Experts,
I am sorry for the basic question but we have a dataset o
Hi Catherine, no, don't do anything to your data, just run it as it is
through recon-all. Also, it is not so good to have different
acquisitions in your study (though it does depend a bit on how different
they actually all). You should make sure that your study is balanced
across the different
Dear Experts,
I am sorry for the basic question but we have a dataset of subjects we like to
analyze for which we have different slice thicknesses and orientations in
dicom format. All T1's collected were SPGR volumes with the same scanner
parameters.
My question was: Do you advice to re-ori
nope
On Thu, 13 Oct 2011, Cat Chong wrote:
>
> Hello Experts:
>
> I am new to Freesurfer. Does the SPGR data have to be of axial LPI
> orientation in order to run through recon all?
>
> thank you,
> cat
>
>
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Hello Experts:
I am new to Freesurfer. Does the SPGR data have to be of axial LPI orientation
in order to run through recon all?
thank you,
cat
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