Try running make_average_volume. This will produce an aseg.mgz file with
all the ROIs merged across all subjects
On 07/13/2016 07:10 AM, Dr Sampada Sinha wrote:
> Dear Bruce, I am trying to generate the following picture (please see
> attached) for eod vs lod groups. Can you please tell me how
Dear Bruce, I am trying to generate the following picture (please see
attached) for eod vs lod groups. Can you please tell me how to do this?
Thanks and regards,
Sampada
On Tue, Jul 12, 2016 at 6:44 PM, Bruce Fischl
wrote:
> Hi Sampada
>
> why not just take the volume of the hippocampus from t
Hi Sampada
why not just take the volume of the hippocampus from the aseg.stats? Why
do you want an mgz? You just want one number per subject, right?
Bruce
On Tue, 12 Jul 2016, Dr Sampada Sinha wrote:
Dear Bruce,
Thanks for you for your response. I am trying to generate an average
hippo
Dear Bruce,
Thanks for you for your response. I am trying to generate an average
hippocampal volume and its correlation with HAM-D score in early and late
onset depression (eod vs lod). One way I tried to do it was by binarizing
and concatanating the hippocampal volumes and then run mri_glmfit. B
Hi Sampada
can you elaborate a bit? What are you trying to achieve? Do you want an
average hippocampus? Average maps of subfields? What hypothesis are you
trying to test? The individual subject data is not resampled to a common
coordinate system, so just averaging them as is won't produce anyth
Dear freesurfer experts,
Will you please let me know if it's possible to get one average mgz image
file by concatenating the hippocampal volumes of different subjects using
dev version? Since, I already have the hippocampal subfields mgz volume
files, I intend to run the glmfit later on between tw
