Do all subjects have this problem or just this one? Have you looked at
orig.mgz to rule out any major problems?
On 6/30/20 8:13 AM, Ian wrote:
External Email - Use Caution
Here you go Doug, thanks.
docker@7d97b79d7546:/execute/freesurfer2016/mri$ mri_nu_correct.mni
--n 1 --proto-ite
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Here you go Doug, thanks.
docker@7d97b79d7546:/execute/freesurfer2016/mri$ mri_nu_correct.mni --n
1 --proto-iters 1000 --distance 50 --no-rescale --i orig.mgz --o
orig_nu.mgz
/execute/freesurfer2016/mri
/usr/local/freesurfer/bin/mri_nu_correct.mni
-
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I have attached the log - is there any chance you could tell me what the
problem is?
Thanks,
Ian
--
Mon Jun 29 10:53:22 UTC 2020
/execute/freesurfer2016
/usr/local/freesurfer/bin/recon-all
-all -subjid ./freesurfer2016
subjid freesurfer2016
setenv
Not sure. Can you run this
cd /execute/freesurfer2016/mri
mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale
--i orig.mgz --o orig_nu.mgz
and send the terminal output?
On 6/29/2020 7:01 AM, Ian wrote:
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I have attached the log - is th
