Re: [Freesurfer] Recon-all: stochastic mri_nu_correct error when run on HPC cluster

urfer] Recon-all: stochastic mri_nu_correct error when run > on > HPC cluster > > That is a very odd error and I havent seen anything like it that I can recall. > > My initial thoughts are that the nu_evaluate and nu_correct commands are part > of the mni tools shipped with freesur

Re: [Freesurfer] Recon-all: stochastic mri_nu_correct error when run on HPC cluster

That is a very odd error and I havent seen anything like it that I can recall. My initial thoughts are that the nu_evaluate and nu_correct commands are part of the mni tools shipped with freesurfer. The mni tools do a lot of reading, writing and deleting of temporary files. (You can see how it

[Freesurfer] Recon-all: stochastic mri_nu_correct error when run on HPC cluster

Hi FreeSurfer Developers, I'm running freesurfer from the HCP pipeline developed by the Washington University in St. Louis. It ran just fine on our university's cluster, but when I migrated the pipeline to Exacloud, Intel's HPC cluster, the recon-all command began randomly failing. Occasionally