/usr/lib64/GLoverride:/usr/lib/GLoverride is a Martinos Center specific
thing. This is where I copy the original Mesa libGL.so.* files before
they get overwritten by the ATI or Nvidia installers. Unfortunately
the dang NVIDIA installer keeps finding them there and deleting them
so I have to rest
David,
Here at the MGH NMR Center we have a number of centos5 32b and 64b
machines that run freesurfer, including tksurfer.
In your case, you are running it via an X-Windows server on a Windows
machine, which introduces an additional complication, since the client
and server drivers must both sup
Hello, everyone. I received a very nice note from Siddharth Srivastava
in response to my initial post. Unfortunately, his suggestion (shared
library load order) did not have any effect. On a closer look I see that
the tksurfer script, which calls tksurfer.bin, already ensures that the
correct F
Sid,
Yes, you can run:
recon-all -s subjid -lgi
after your current recon-all run has completed. It will run just the
local GI steps. you will need matlab installed to run the -lgi stage.
Nick
On Fri, 2008-11-21 at 16:47 -0800, Siddharth Srivastava wrote:
> Hi Nick,
> Thanks. i
Hi Nick,
Thanks. i restarted as you recommended. My initial command had
a -lGI flag. Obviously, it will not be considered during this second run. I
do
not want to restart the process now, but i wanted to know if the GI can be
calculated
separately after all the stages of recon-all are d
Sid,
Firstly, make sure it didnt crash because of bad data. That is, if you
can make the program that crashed crash again, check the input data. As
for restarting, you can either use:
recon-all -s subjid -make all
which will make just the files that are missing or out-of-date relative
to their
Hi again, everyone,
Apologies for another newbie question, but i
was wondering what is the best thing
to be done in case the program crashes in midflight, during the recon-all
invocation. As of now, i have
identified that the processing crashed sometime during mris_mak
