Make sure that the MRS_MASK.mgz itself has some voxels with value=1, and
make sure that there are enough of them to fit into at least one
functional voxel.
Make sure that the registration is accurate.
When you run run fcseed-sess, add -debug, capture the output, and send
it to me.
On 02/18/
I have also run as followed but the error persist.
mri_convert $SUBJECTS_DIR/Subj2/MRS_Voxel_FS_space.nii.gz
$SUBJECTS_DIR/Subj2/mri/MRS_MASK2.mgz
mri_convert $SUBJECTS_DIR/Subj2/MRS_Voxel_FS_space.nii.gz MRS_MASK2.mgz
fcseed-config -segid 1 -seg MRS_MASK2.mgz -fsd rest -mean -cfg MRS_MASK2.
The problem persist.
Stefano
>Messaggio originale
>Da: Douglas N Greve
>Data: 19-feb-2016 0.25
>A:
>Ogg: Re: [Freesurfer] FS-FAST using MRS voxel or .label as seed
>
>
>I think it may be our fcseed-config command line
>fcseed-config -segid 1 -seg $SUBJECTS_DIR/Subj/mri/MRS_MASK.mgz -fs
