Re: [Freesurfer] R: R: recon-all skull stripping

2019-10-16 Thread Bruce Fischl
...@nmr.mgh.harvard.edu On Behalf Of Bruce Fischl Sent: Wednesday, October 16, 2019 12:48 PM To: Freesurfer support list Subject: Re: [Freesurfer] R: R: recon-all skull stripping oh, sure, you can just run that part of recon-all. You don't need to rerun the whole thing cheers Bruce On Wed, 1

Re: [Freesurfer] R: R: recon-all skull stripping

2019-10-16 Thread Krieger, Donald N.
: Freesurfer support list Subject: Re: [Freesurfer] R: R: recon-all skull stripping oh, sure, you can just run that part of recon-all. You don't need to rerun the whole thing cheers Bruce On Wed, 16 Oct 2019, Inglese, Marianna wrote: > > External Email - Use Caution &g

Re: [Freesurfer] R: R: recon-all skull stripping

2019-10-16 Thread Bruce Fischl
oh, sure, you can just run that part of recon-all. You don't need to rerun the whole thing cheers Bruce On Wed, 16 Oct 2019, Inglese, Marianna wrote: External Email - Use Caution Hi Bruce, what I mean is that, two of the main outputs of recon-all are T1.mgz (which has the sku

[Freesurfer] R: R: recon-all skull stripping

2019-10-16 Thread Inglese, Marianna
External Email - Use Caution Hi Bruce, what I mean is that, two of the main outputs of recon-all are T1.mgz (which has the skull) and brain.mgz (which has been skull stripped). For a group of patients, I lost the brain.mgz file and I still have the T1.mgz. I was wondering if th