Re: [Freesurfer] Query about transformations in the recon-all

2015-08-21 Thread Bruce Fischl
transform from native space to MNI305 (We perform recon-all in the native space)?   Best, Feng     发件人:Bruce Fischl 发送时间:2015-08-18 22:09 主题:Re: [Freesurfer] Query about transformations in the recon-all 收件人:"Frees

Re: [Freesurfer] Query about transformations in the recon-all

2015-08-18 Thread chenhf_uestc
to transform from native space to MNI305 (We perform recon-all in the native space)? Best, Feng 发件人:Bruce Fischl 发送时间:2015-08-18 22:09 主题:Re: [Freesurfer] Query about transformations in the recon-all 收件人:"Freesurfer support list" 抄送: Hi Feng we compute many transforms for many re

Re: [Freesurfer] Query about transformations in the recon-all

2015-08-18 Thread Bruce Fischl
Hi Feng we compute many transforms for many reasons. The em reg is computed once in the image with skull to help with skull stripping, then again to the GCA atlas to initialize the nonlinear transform for computing the aseg segmentation. cheers Bruce On Tue, 18 Aug 2015, chenhf_uestc wrote

[Freesurfer] Query about transformations in the recon-all

2015-08-18 Thread chenhf_uestc
Dear Freesurfer experts, I have some questions in the recon-all. After reading online manual and discussing with the experts in the maillist, I have known all the recon-all procedures performed in the individual native space. However, I very confuse that there are many transformations in the re